SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200721
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr4:2374833-2419866
Size: 45033
Super-enhancer rank 721
Number of SE elements: 9
ChIP density(Case|Control): 46996.4388|5984.8857
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZFYVE28 ;
ROSE Overlap ZFYVE28 ; CFAP99 ;
ROSE Proximal RNF4 ; ZFYVE28 ;
ROSE Closest ZFYVE28 ;
Lasso POLN ; ZFYVE28 ; HAUS3 ; RP11-503N18.3 ;
PreSTIGE ;
ABC CFAP99 ; ZFYVE28 ; RNF4 ; NAT8L ; POLN ; MXD4 ; HAUS3 ;
BETA ZFYVE28 ; RNF4 ; CFAP99 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200721 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers