SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_04_000200713
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr19:1590157-1607212
Size: 17055
Super-enhancer rank 713
Number of SE elements: 2
ChIP density(Case|Control): 43870.5765|2619.648
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MBD3 ;
ROSE Overlap UQCR11 ; MBD3 ;
ROSE Proximal MBD3 ; MEX3D ; TCF3 ;
ROSE Closest MBD3 ;
Lasso ;
PreSTIGE ;
ABC MBD3 ; UQCR11 ;
BETA TCF3 ; MBD3 ; UQCR11 ; MEX3D ; ADAMTSL5 ; PLK5 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200713 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers