SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_04_000200712
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr1:32100240-32143233
Size: 42993
Super-enhancer rank 712
Number of SE elements: 5
ChIP density(Case|Control): 52619.1327|11350.152
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KPNA6 ;
ROSE Overlap KPNA6 ; TMEM39B ;
ROSE Proximal MIR5585 ; TXLNA ;
ROSE Closest KPNA6 ;
Lasso ;
PreSTIGE ;
ABC PEF1 ;
BETA CCDC28B ; IQCC ; KPNA6 ; TXLNA ; MIR5585 ; DCDC2B ; TMEM39B ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200712 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers