SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_04_000200671
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr3:196496302-196533745
Size: 37443
Super-enhancer rank 671
Number of SE elements: 5
ChIP density(Case|Control): 49009.1427|6500.1048
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SMCO1 ;
ROSE Overlap RNF168 ; SMCO1 ;
ROSE Proximal FBXO45 ; WDR53 ;
ROSE Closest SMCO1 ;
Lasso TFRC ; UBXN7 ; RNF168 ; FBXO45 ; WDR53 ; SMCO1 ;
PreSTIGE ;
ABC ;
BETA RNF168 ; SMCO1 ; WDR53 ; FBXO45 ; UBXN7 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200671 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers