SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_04_000200667
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr1:171740810-171793779
Size: 52969
Super-enhancer rank 667
Number of SE elements: 7
ChIP density(Case|Control): 52095.0115|9375.513
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: METTL13 ;
ROSE Overlap METTL13 ; VAMP4 ;
ROSE Proximal METTL13 ; DNM3 ; VAMP4 ;
ROSE Closest METTL13 ;
Lasso METTL13 ; VAMP4 ;
PreSTIGE ;
ABC METTL13 ;
BETA VAMP4 ; DNM3-IT1 ; DNM3 ; METTL13 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200667 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers