SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200625
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr1:145293084-145391515
Size: 98431
Super-enhancer rank 625
Number of SE elements: 30
ChIP density(Case|Control): 57365.5868|13229.1264
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RNVU1-14 ;
ROSE Overlap NBPF20 ;
ROSE Proximal RNVU1-14 ;
ROSE Closest RNVU1-14 ;
Lasso ;
PreSTIGE ;
ABC LINC01719 ;
BETA RNVU1-14 ; NBPF20 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200625 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers