SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200580
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr2:218281819-218296327
Size: 14508
Super-enhancer rank 580
Number of SE elements: 1
ChIP density(Case|Control): 47470.176|1446.4476
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TMBIM1 ;
ROSE Overlap PNKD ; TMBIM1 ;
ROSE Proximal AAMP ; MIR6810 ; GPBAR1 ; PNKD ; MIR6513 ;
ROSE Closest TMBIM1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA GPBAR1 ; MIR6810 ; AAMP ; PNKD ; SLC11A1 ; CATIP ; CATIP-AS2 ; ARPC2 ; TMBIM1 ; MIR6513 ; CATIP-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200580 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers