SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200475
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr12:93356270-93383417
Size: 27147
Super-enhancer rank 475
Number of SE elements: 4
ChIP density(Case|Control): 54847.7988|4053.0471
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC643339 ;
ROSE Overlap NUDT4 ; LOC643339 ;
ROSE Proximal NUDT4 ;
ROSE Closest LOC643339 ;
Lasso SOCS2 ; NUDT4 ; UBE2N ;
PreSTIGE ;
ABC ;
BETA MRPL42 ; NUDT4 ; LOC643339 ; UBE2N ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200475 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers