SEdb 2.0
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Super-enhancer overview

SE ID: SE_04_000200456
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr1:36135000-36163139
Size: 28139
Super-enhancer rank 456
Number of SE elements: 4
ChIP density(Case|Control): 58425.0057|6280.6248
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TRAPPC3;
ROSE Overlap TRAPPC3; MAP7D1;
ROSE Proximal MAP7D1; COL8A2; TRAPPC3; ADPRHL2;
ROSE Closest TRAPPC3;
Lasso THRAP3; ADPRHL2; RP11-268J15.5; EVA1B; LSM10; STK40; SH3D21;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200456 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers