SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200431
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr5:181238976-181250792
Size: 11816
Super-enhancer rank 431
Number of SE elements: 1
ChIP density(Case|Control): 54951.4896|1843.296
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GNB2L1 ;
ROSE Overlap GNB2L1 ; SNORD96A ; CTC-338M12.4 ; SNORD95 ;
ROSE Proximal TRIM7 ; LOC102577426 ; TRIM41 ; MIR4638 ; TRIM52-AS1 ; TRIM52 ;
ROSE Closest GNB2L1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SNORD96A ; TRIM52 ; TRIM52-AS1 ; TRIM7 ; OR2V2 ; LOC102577426 ; TRIM41 ; CTC-338M12.4 ; MIR4638 ; GNB2L1 ; LOC100132287 ; LOC100132062 ; SNORD95 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200431 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers