SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200413
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr3:179255607-179336291
Size: 80684
Super-enhancer rank 413
Number of SE elements: 10
ChIP density(Case|Control): 65571.8868|11489.4016
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZNF639 ;
ROSE Overlap KCNMB3 ; ZNF639 ;
ROSE Proximal KCNMB3 ; MFN1 ;
ROSE Closest ZNF639 ;
Lasso GNB4 ; ZNF639 ; PIK3CA ; ACTL6A ; NDUFB5 ; MFN1 ; KCNMB3 ; ZMAT3 ;
PreSTIGE ;
ABC ACTL6A ; NDUFB5 ; MRPL47 ;
BETA ZNF639 ; KCNMB3 ; MFN1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200413 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers