SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200381
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr6:26050698-26071985
Size: 21287
Super-enhancer rank 381
Number of SE elements: 4
ChIP density(Case|Control): 59495.0363|3648.5918
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HIST1H1C ;
ROSE Overlap HIST1H1C ;
ROSE Proximal HFE ; HIST1H2AB ; HIST1H3C ; HIST1H1A ; HIST1H3A ; HIST1H1T ; HIST1H4B ; HIST1H2BB ; HIST1H4C ; HIST1H3B ; HIST1H4A ;
ROSE Closest HIST1H1C ;
Lasso BTN2A2 ; HIST1H4B ; HIST1H3B ; HIST1H2AB ; HIST1H1E ; HIST1H2AC ; HIST1H1T ; HIST1H4A ; HIST1H2BB ; HIST1H3C ; HIST1H3A ;
PreSTIGE ;
ABC HIST1H3C ; HIST1H4C ; HFE ; HIST1H1C ; HIST1H2AB ; HIST1H3B ; HIST1H1T ; HIST1H2BC ; HIST1H2AC ;
BETA HIST1H3B ; HIST1H2BC ; HIST1H4C ; TRIM38 ; HFE ; HIST1H2BD ; HIST1H2AB ; HIST1H2AC ; HIST1H4A ; HIST1H1A ; HIST1H2BB ; HIST1H3C ; HIST1H1C ; HIST1H4B ; HIST1H1E ; HIST1H3A ; HIST1H1T ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200381 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers