SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200370
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr19:48308954-48339858
Size: 30904
Super-enhancer rank 370
Number of SE elements: 4
ChIP density(Case|Control): 62840.1936|5881.0312
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: EMP3 ;
ROSE Overlap TMEM143 ; EMP3 ; CCDC114 ;
ROSE Proximal ZNF114 ; SYNGR4 ; TMEM143 ;
ROSE Closest EMP3 ;
Lasso SYNGR4 ; CCDC114 ; CARD8 ; EMP3 ; TMEM143 ;
PreSTIGE ;
ABC ;
BETA TMEM143 ; CARD8 ; CARD8-AS1 ; SYNGR4 ; ZNF114 ; CCDC114 ; GRIN2D ; KDELR1 ; EMP3 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200370 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers