SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200344
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr3:9971455-9989308
Size: 17853
Super-enhancer rank 344
Number of SE elements: 3
ChIP density(Case|Control): 62483.7147|4029.4221
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: EMC3 ;
ROSE Overlap EMC3 ; EMC3-AS1 ;
ROSE Proximal CRELD1 ; LOC401052 ; CIDECP ; PRRT3 ; PRRT3-AS1 ; FANCD2 ;
ROSE Closest EMC3 ;
Lasso ;
PreSTIGE ;
ABC CRELD1 ;
BETA CIDECP ; EMC3 ; IL17RE ; CRELD1 ; IL17RC ; PRRT3 ; FANCD2 ; PRRT3-AS1 ; JAGN1 ; LOC401052 ; EMC3-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200344 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers