SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_04_000200322
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr1:100325275-100368257
Size: 42982
Super-enhancer rank 322
Number of SE elements: 8
ChIP density(Case|Control): 67627.8788|6692.2974
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CDC14A ;
ROSE Overlap CDC14A ;
ROSE Proximal MIR553 ;
ROSE Closest CDC14A ;
Lasso CDC14A ; TRMT13 ; DBT ; RTCA ; SASS6 ;
PreSTIGE ;
ABC ;
BETA RTCA ; CDC14A ; RTCA-AS1 ; DBT ; MIR553 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200322 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers