SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200321
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr19:12777194-12797108
Size: 19914
Super-enhancer rank 321
Number of SE elements: 3
ChIP density(Case|Control): 64095.2004|3144.4206
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR5684 ;
ROSE Overlap PRDX2 ; JUNB ; MIR5684 ;
ROSE Proximal BEST2 ; RTBDN ; ASNA1 ; HOOK2 ; RNASEH2A ; C19orf43 ; MAST1 ;
ROSE Closest MIR5684 ;
Lasso ;
PreSTIGE ;
ABC MAN2B1 ; WDR83 ; WDR83OS ; DHPS ;
BETA RTBDN ; RNASEH2A ; MIR6794 ; TNPO2 ; C19orf43 ; FBXW9 ; PRDX2 ; MIR5684 ; HOOK2 ; MAST1 ; SNORD41 ; DNASE2 ; JUNB ; BEST2 ; ASNA1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200321 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers