SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200301
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr4:6887298-6927777
Size: 40479
Super-enhancer rank 301
Number of SE elements: 6
ChIP density(Case|Control): 68733.342|6298.5324
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TBC1D14 ;
ROSE Overlap TBC1D14 ;
ROSE Proximal ;
ROSE Closest TBC1D14 ;
Lasso GRPEL1 ; TBC1D14 ;
PreSTIGE ;
ABC GRPEL1 ; TADA2B ; CCDC96 ; TBC1D14 ; KIAA0232 ; BLOC1S4 ; MRFAP1L1 ; S100P ; LOC93622 ; LOC105374366 ; MAN2B2 ; FLJ36777 ; AFAP1-AS1 ; CPZ ; SH3TC1 ; ABLIM2 ; MRFAP1 ; LOC285484 ; EVC ; JAKMIP1 ;
BETA TBC1D14 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200301 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers