SEdb 2.0
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Super-enhancer overview

SE ID: SE_04_000200289
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr11:65470346-65481065
Size: 10719
Super-enhancer rank 289
Number of SE elements: 1
ChIP density(Case|Control): 66271.2894|2404.2717
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MALAT1;
ROSE Overlap ;
ROSE Proximal SCYL1; NEAT1; MALAT1; MIR612;
ROSE Closest MALAT1;
Lasso SPDYC; SLC25A45; EHBP1L1; LTBP3; DPF2; SSSCA1; SIPA1; CDC42EP2; SCYL1; FRMD8; TIGD3; FAM89B;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200289 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers