SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200225
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr19:13149381-13168629
Size: 19248
Super-enhancer rank 225
Number of SE elements: 3
ChIP density(Case|Control): 73852.6512|3445.392
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: IER2 ;
ROSE Overlap IER2 ; STX10 ;
ROSE Proximal LYL1 ; TRMT1 ; NACC1 ;
ROSE Closest IER2 ;
Lasso TRMT1 ; NFIX ; STX10 ; LYL1 ; NACC1 ;
PreSTIGE ;
ABC ;
BETA STX10 ; TRMT1 ; IER2 ; LYL1 ; NACC1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200225 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers