SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_04_000200221
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr18:3441936-3456237
Size: 14301
Super-enhancer rank 221
Number of SE elements: 1
ChIP density(Case|Control): 73424.1942|2805.8562
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TGIF1 ;
ROSE Overlap TGIF1 ;
ROSE Proximal TGIF1 ; GAPLINC ;
ROSE Closest TGIF1 ;
Lasso ;
PreSTIGE ;
ABC DLGAP1-AS2 ; NDC80 ; CBX3P2 ; LINC00526 ; LINC00667 ; ZBTB14 ; DLGAP1-AS1 ; SMCHD1 ; EMILIN2 ; LOC727896 ; LPIN2 ; MYOM1 ; GAPLINC ; MYL12A ; LOC104968399 ; MYL12B ; TGIF1 ; METTL4 ;
BETA TGIF1 ; GAPLINC ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200221 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers