SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200212
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr1:30755890-30780211
Size: 24321
Super-enhancer rank 212
Number of SE elements: 1
ChIP density(Case|Control): 77639.9283|5353.0521
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LAPTM5 ;
ROSE Overlap LAPTM5 ;
ROSE Proximal MIR4420 ; MATN1 ; MATN1-AS1 ;
ROSE Closest LAPTM5 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MIR4420 ; LAPTM5 ; MATN1-AS1 ; MATN1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200212 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers