SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200189
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr9:129875527-129889220
Size: 13693
Super-enhancer rank 189
Number of SE elements: 1
ChIP density(Case|Control): 78508.8155|3460.2211
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR6855 ;
ROSE Overlap FNBP1 ; USP20 ;
ROSE Proximal MIR6855 ; C9orf78 ;
ROSE Closest MIR6855 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA USP20 ; TOR1A ; MIR6855 ; C9orf78 ; TOR1B ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200189 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers