SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_04_000200107
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr1:28876133-28936878
Size: 60745
Super-enhancer rank 107
Number of SE elements: 12
ChIP density(Case|Control): 105507.9905|13260.6335
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: EPB41 ;
ROSE Overlap EPB41 ;
ROSE Proximal EPB41 ;
ROSE Closest EPB41 ;
Lasso SRSF4 ; TAF12 ; EPB41 ; GMEB1 ; TRNAU1AP ; YTHDF2 ;
PreSTIGE ;
ABC SNHG12 ;
BETA OPRD1 ; EPB41 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200107 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers