SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200090
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr11:65414606-65438752
Size: 24146
Super-enhancer rank 90
Number of SE elements: 1
ChIP density(Case|Control): 102096.5318|3834.3848
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NEAT1 ;
ROSE Overlap NEAT1 ;
ROSE Proximal SLC25A45 ; FRMD8 ; MIR612 ;
ROSE Closest NEAT1 ;
Lasso ;
PreSTIGE ;
ABC RELA ; KAT5 ; MAP3K11 ; SIPA1 ; PCNX3 ;
BETA SCYL1 ; SLC25A45 ; FRMD8 ; DPF2 ; MIR612 ; MALAT1 ; NEAT1 ; TIGD3 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200090 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers