SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200089
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr6:11901126-11980128
Size: 79002
Super-enhancer rank 89
Number of SE elements: 12
ChIP density(Case|Control): 113067.6624|14749.6734
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC101928253 ;
ROSE Overlap ;
ROSE Proximal LOC101928253 ; HIVEP1 ;
ROSE Closest LOC101928253 ;
Lasso HIVEP1 ;
PreSTIGE ;
ABC ADTRP ; LOC101928253 ; HIVEP1 ; TMEM170B ; EDN1 ; NEDD9 ; ELOVL2-AS1 ; LOC101928191 ; ELOVL2 ; SMIM13 ; SYCP2L ; ERVFRD-1 ;
BETA LOC101928253 ; HIVEP1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200089 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers