SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200086
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr1:26682525-26724736
Size: 42211
Super-enhancer rank 86
Number of SE elements: 8
ChIP density(Case|Control): 109921.6651|9134.4604
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ARID1A ;
ROSE Overlap ARID1A ;
ROSE Proximal ;
ROSE Closest ARID1A ;
Lasso PIGV ;
PreSTIGE ;
ABC ZNF683 ; ZNF593 ; CNKSR1 ; LOC101928324 ; SH3BGRL3 ; UBXN11 ; CATSPER4 ; DHDDS ; CEP85 ; AIM1L ; CD52 ; LIN28A ;
BETA ARID1A ; PIGV ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200086 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers