SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200083
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr13:91346372-91354310
Size: 7938
Super-enhancer rank 83
Number of SE elements: 1
ChIP density(Case|Control): 105337.26|3845.1672
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR17 ;
ROSE Overlap MIR18A ; MIR19B1 ; MIR19A ; MIR17 ; MIR92A1 ; MIR20A ; MIR17HG ;
ROSE Proximal MIR17HG ; GPC5 ;
ROSE Closest MIR17 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MIR92A1 ; MIR20A ; MIR17HG ; MIR18A ; GPC5 ; MIR19A ; MIR19B1 ; MIR17 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200083 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers