SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200057
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr1:179002549-179084214
Size: 81665
Super-enhancer rank 57
Number of SE elements: 10
ChIP density(Case|Control): 130198.5095|16259.5015
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: FAM20B ;
ROSE Overlap FAM20B ; TOR3A ;
ROSE Proximal ;
ROSE Closest FAM20B ;
Lasso FAM20B ; TOR3A ;
PreSTIGE ;
ABC FAM20B ; LHX4 ; SOAT1 ; FLJ23867 ; QSOX1 ; AXDND1 ; C1orf220 ; RALGPS2 ; RASAL2-AS1 ; LOC730102 ; LHX4-AS1 ; ABL2 ; TOR3A ;
BETA FAM20B ; TOR3A ; ABL2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200057 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers