SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200055
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr16:70394883-70440423
Size: 45540
Super-enhancer rank 55
Number of SE elements: 5
ChIP density(Case|Control): 122083.632|7828.326
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ST3GAL2 ;
ROSE Overlap ST3GAL2 ;
ROSE Proximal DDX19A ; FUK ; LOC100506083 ; RNU6-23P ;
ROSE Closest ST3GAL2 ;
Lasso COG4 ; ST3GAL2 ; FUK ; DDX19A ; SF3B3 ;
PreSTIGE ;
ABC ;
BETA LOC100506083 ; RNU6-23P ; FUK ; DDX19A ; ST3GAL2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200055 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers