SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200053
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr4:10160663-10207074
Size: 46411
Super-enhancer rank 53
Number of SE elements: 6
ChIP density(Case|Control): 122585.3743|6803.8526
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: WDR1 ;
ROSE Overlap ;
ROSE Proximal WDR1 ;
ROSE Closest WDR1 ;
Lasso WDR1 ;
PreSTIGE ;
ABC ZNF518B ; WDR1 ; CPZ ; TRMT44 ; ACOX3 ; SH3TC1 ;
BETA WDR1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200053 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers