SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200027
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr6:20399991-20481533
Size: 81542
Super-enhancer rank 27
Number of SE elements: 10
ChIP density(Case|Control): 155590.2902|15419.5922
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: E2F3 ;
ROSE Overlap E2F3 ;
ROSE Proximal ;
ROSE Closest E2F3 ;
Lasso E2F3 ; CDKAL1 ;
PreSTIGE ;
ABC E2F3 ; CDKAL1 ; SOX4 ; MBOAT1 ;
BETA E2F3 ; CDKAL1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200027 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers