SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000200022
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr10:17407470-17489656
Size: 82186
Super-enhancer rank 22
Number of SE elements: 7
ChIP density(Case|Control): 163213.1774|12566.2394
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ST8SIA6 ;
ROSE Overlap ST8SIA6 ; ST8SIA6-AS1 ;
ROSE Proximal ;
ROSE Closest ST8SIA6 ;
Lasso ST8SIA6 ;
PreSTIGE ST8SIA6 ;
ABC VIM ; ST8SIA6-AS1 ; TRDMT1 ; ST8SIA6 ; RSU1 ; HACD1 ; STAM-AS1 ; MINDY3 ; STAM ; VIM-AS1 ; PTER ;
BETA ST8SIA6 ; ST8SIA6-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200022 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers