SEdb 2.0
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Super-enhancer overview

SE ID: SE_04_000200012
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: cold shocked K562
Genomic region: chr3:196048442-196208894
Size: 160452
Super-enhancer rank 12
Number of SE elements: 32
ChIP density(Case|Control): 217605.0024|28480.23
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LINC00885;
ROSE Overlap ZDHHC19; TFRC; LINC00885;
ROSE Proximal SLC51A;
ROSE Closest LINC00885;
Lasso TNK2; TFRC; TM4SF19; PCYT1A; RNF168;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000200012 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers