SEdb 3.0
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Super-enhancer overview

SE ID: SE_04_000100089
Species: Human
Data source: NGDC GSA
Biosample type: Cell line
Tissue type: Blood
Biosample name: heat shocked K562
Genomic region: chr1:28876528-28936753
Size: 60225
Super-enhancer rank 89
Number of SE elements: 11
ChIP density(Case|Control): 158951.8425|18495.0975
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: EPB41 ;
ROSE Overlap EPB41 ;
ROSE Proximal EPB41 ;
ROSE Closest EPB41 ;
Lasso SRSF4 ; EPB41 ; GMEB1 ; TRNAU1AP ; YTHDF2 ;
PreSTIGE ;
ABC SNHG12 ;
BETA OPRD1 ; EPB41 ;

Network diagram of super-enhancer and associated genes

Expression of SE_04_000100089 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers