SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_03_000300040
Species: Human
Data source: GGR
Biosample type: Primary cell
Tissue type: Foreskin
Biosample name: foreskin-keratinocyte-calcium5.5day
Genomic region: chr3:190302543-190347248
Size: 44705
Super-enhancer rank 40
Number of SE elements: 6
ChIP density(Case|Control): 40230.0295|10054.1545
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CLDN1;
ROSE Overlap CLDN1;
ROSE Proximal CLDN16;
ROSE Closest CLDN1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_03_000300040 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers