SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_319801053
Species: Human
Data source: NCBI GEO/SRA
Biosample type: cell line
Tissue type: lung
Biosample name: A549_CT
Genomic region: chr17:28322454-28351709
Size: 29255
Super-enhancer rank 1053
Number of SE elements: 12
ChIP density(Case|Control): 12465.5555|2738.268
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TNFAIP1 ;
ROSE Overlap POLDIP2 ; TNFAIP1 ; TMEM97 ; IFT20 ;
ROSE Proximal VTN ; KRT18P55 ; IFT20 ; TMEM199 ; MIR4723 ; SARM1 ; SEBOX ;
ROSE Closest TNFAIP1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_319801053 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers