SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_319800619
Species: Human
Data source: NCBI GEO/SRA
Biosample type: cell line
Tissue type: lung
Biosample name: A549_CT
Genomic region: chr9:3502689-3528053
Size: 25364
Super-enhancer rank 619
Number of SE elements: 3
ChIP density(Case|Control): 16413.0444|2254.8596
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RFX3 ;
ROSE Overlap RFX3 ;
ROSE Proximal RFX3 ;
ROSE Closest RFX3 ;
Lasso ;
PreSTIGE ;
ABC RFX3 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_319800619 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers