SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_319800558
Species: Human
Data source: NCBI GEO/SRA
Biosample type: cell line
Tissue type: lung
Biosample name: A549_CT
Genomic region: chrX:12973958-13031037
Size: 57079
Super-enhancer rank 558
Number of SE elements: 10
ChIP density(Case|Control): 18465.0565|3356.2452
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TMSB4X ;
ROSE Overlap TMSB4X ;
ROSE Proximal TLR8-AS1 ; FAM9C ;
ROSE Closest TMSB4X ;
Lasso ;
PreSTIGE ;
ABC TMSB4X ; FANCB ; MSL3 ; FRMPD4 ; TRAPPC2 ; RAB9A ; TCEANC ; PRPS2 ; MOSPD2 ; OFD1 ; GEMIN8 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_319800558 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers