SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_319800540
Species: Human
Data source: NCBI GEO/SRA
Biosample type: cell line
Tissue type: lung
Biosample name: A549_CT
Genomic region: chr12:12779946-12846093
Size: 66147
Super-enhancer rank 540
Number of SE elements: 16
ChIP density(Case|Control): 21332.4075|5827.5507
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: DDX47 ;
ROSE Overlap APOLD1 ; DDX47 ;
ROSE Proximal MIR613 ; RPL13AP20 ; GPRC5A ;
ROSE Closest DDX47 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_319800540 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers