SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_319800473
Species: Human
Data source: NCBI GEO/SRA
Biosample type: cell line
Tissue type: lung
Biosample name: A549_CT
Genomic region: chr12:96193637-96242821
Size: 49184
Super-enhancer rank 473
Number of SE elements: 10
ChIP density(Case|Control): 20637.6064|3669.1264
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ELK3 ;
ROSE Overlap ELK3 ;
ROSE Proximal ELK3 ;
ROSE Closest ELK3 ;
Lasso ;
PreSTIGE ;
ABC LOC105369920 ; CCDC38 ; SNRPF ; AMDHD1 ; LOC105369921 ; NTN4 ; PGAM1P5 ; USP44 ; METAP2 ; NR2C1 ; CEP83 ; CEP83-AS1 ; NDUFA12 ; NEDD1 ; CFAP54 ; CDK17 ; ELK3 ; LTA4H ; HAL ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_319800473 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers