SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_319800394
Species: Human
Data source: NCBI GEO/SRA
Biosample type: cell line
Tissue type: lung
Biosample name: A549_CT
Genomic region: chr19:39111197-39194297
Size: 83100
Super-enhancer rank 394
Number of SE elements: 24
ChIP density(Case|Control): 29201.34|10212.99
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PAK4 ;
ROSE Overlap PAPL ; PAK4 ;
ROSE Proximal SYCN ; PAK4 ; NCCRP1 ;
ROSE Closest PAK4 ;
Lasso ;
PreSTIGE ;
ABC ACTN4 ; ZNF607 ; PPP1R14A ; KCNK6 ; CATSPERG ; PSMD8 ; GGN ; SPRED3 ; FAM98C ; RASGRP4 ; LOC105372397 ; MRPS12 ; SARS2 ; FBXO17 ; IFNL1 ; NFKBIB ; SIRT2 ; RINL ; HNRNPL ; ECH1 ; MAP4K1 ; EIF3K ; CAPN12 ; LGALS7B ; LGALS4 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_319800394 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers