SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_319800385
Species: Human
Data source: NCBI GEO/SRA
Biosample type: cell line
Tissue type: lung
Biosample name: A549_CT
Genomic region: chr3:10168060-10235565
Size: 67505
Super-enhancer rank 385
Number of SE elements: 17
ChIP density(Case|Control): 24409.808|5211.386
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: IRAK2 ;
ROSE Overlap IRAK2 ;
ROSE Proximal TATDN2 ; VHL ; GHRLOS ; LINC00852 ;
ROSE Closest IRAK2 ;
Lasso ;
PreSTIGE ;
ABC VHL ; IRAK2 ; IL17RE ; PRRT3 ; EMC3-AS1 ; LOC401052 ; SEC13 ; GHRL ; EMC3 ; CIDECP ; TATDN2 ; FANCD2 ; BRK1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_319800385 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers