SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_319800323
Species: Human
Data source: NCBI GEO/SRA
Biosample type: cell line
Tissue type: lung
Biosample name: A549_CT
Genomic region: chr20:5056887-5116769
Size: 59882
Super-enhancer rank 323
Number of SE elements: 16
ChIP density(Case|Control): 27443.9206|6610.9728
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TMEM230 ;
ROSE Overlap PCNA ; TMEM230 ;
ROSE Proximal PCNA-AS1 ; SLC23A2 ; CDS2 ;
ROSE Closest TMEM230 ;
Lasso ;
PreSTIGE ;
ABC TMEM230 ; PCNA-AS1 ; CDS2 ; PCNA ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_319800323 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers