SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_319800302
Species: Human
Data source: NCBI GEO/SRA
Biosample type: cell line
Tissue type: lung
Biosample name: A549_CT
Genomic region: chr4:7803462-7891520
Size: 88058
Super-enhancer rank 302
Number of SE elements: 26
ChIP density(Case|Control): 27245.1452|4869.6074
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC389199 ;
ROSE Overlap AFAP1 ;
ROSE Proximal LOC389199 ; AFAP1-AS1 ; AFAP1 ;
ROSE Closest LOC389199 ;
Lasso ;
PreSTIGE ;
ABC PPP2R2C ; ACOX3 ; MAN2B2 ; MRFAP1 ; LOC105374366 ; WFS1 ; SH3TC1 ; TRMT44 ; LOC93622 ; AFAP1 ; LOC389199 ; PSAPL1 ; SORCS2 ; ABLIM2 ; FLJ36777 ; GRPEL1 ; TADA2B ; TBC1D14 ; MRFAP1L1 ; BLOC1S4 ; KIAA0232 ; CCDC96 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_319800302 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers