SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_319800279
Species: Human
Data source: NCBI GEO/SRA
Biosample type: cell line
Tissue type: lung
Biosample name: A549_CT
Genomic region: chr3:53216470-53273687
Size: 57217
Super-enhancer rank 279
Number of SE elements: 16
ChIP density(Case|Control): 26085.2303|2574.765
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TKT ;
ROSE Overlap TKT ;
ROSE Proximal ;
ROSE Closest TKT ;
Lasso ;
PreSTIGE ;
ABC RFT1 ; PRKCD ; TKT ; NISCH ; NT5DC2 ; SMIM4 ; SPCS1 ; GLT8D1 ; NEK4 ; TMEM110-MUSTN1 ; TMEM110 ; SFMBT1 ; DCP1A ; SELENOK ; ACTR8 ; IL17RB ; CHDH ; SEMA3G ; PHF7 ; BAP1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_319800279 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers