SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_319800235
Species: Human
Data source: NCBI GEO/SRA
Biosample type: cell line
Tissue type: lung
Biosample name: A549_CT
Genomic region: chr11:34633429-34686526
Size: 53097
Super-enhancer rank 235
Number of SE elements: 13
ChIP density(Case|Control): 31114.842|4693.7748
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: EHF ;
ROSE Overlap EHF ;
ROSE Proximal ;
ROSE Closest EHF ;
Lasso ;
PreSTIGE ;
ABC LOC100507144 ; APIP ; PDHX ; CAT ; ABTB2 ; FBXO3-AS1 ; FBXO3 ; CD44 ; FJX1 ; TRIM44 ; LDLRAD3 ; COMMD9 ; PRR5L ; TRAF6 ; C11orf74 ; PRRG4 ; QSER1 ; DEPDC7 ; LINC00294 ; CSTF3 ; CSTF3-AS1 ; HIPK3 ; C11orf91 ; CD59 ; CAPRIN1 ; NAT10 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_319800235 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers