SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_319800180
Species: Human
Data source: NCBI GEO/SRA
Biosample type: cell line
Tissue type: lung
Biosample name: A549_CT
Genomic region: chr4:39495794-39570458
Size: 74664
Super-enhancer rank 180
Number of SE elements: 16
ChIP density(Case|Control): 34972.6176|4024.3896
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: UGDH-AS1 ;
ROSE Overlap UGDH ; UGDH-AS1 ; SMIM14 ;
ROSE Proximal RPL9 ; LOC401127 ; UGDH ; LIAS ;
ROSE Closest UGDH-AS1 ;
Lasso ;
PreSTIGE ;
ABC UGDH ; UGDH-AS1 ; PDS5A ; UBE2K ; SMIM14 ; N4BP2 ; PGM2 ; LIAS ; RPL9 ; KLB ; LOC344967 ; TLR1 ; CHRNA9 ; KLF3-AS1 ; NSUN7 ; FAM114A1 ; WDR19 ; KLF3 ; RFC1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_319800180 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers