SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_319800174
Species: Human
Data source: NCBI GEO/SRA
Biosample type: cell line
Tissue type: lung
Biosample name: A549_CT
Genomic region: chr9:4220403-4300088
Size: 79685
Super-enhancer rank 174
Number of SE elements: 16
ChIP density(Case|Control): 38543.6345|7060.091
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GLIS3 ;
ROSE Overlap GLIS3 ;
ROSE Proximal ;
ROSE Closest GLIS3 ;
Lasso ;
PreSTIGE ;
ABC GLIS3 ; SLC1A1 ; AK3 ; CDC37L1 ; RCL1 ; JAK2 ; INSL4 ; RIC1 ; PDCD1LG2 ; CD274 ; RFX3 ; CDC37L1-AS1 ; SPATA6L ; PLPP6 ; PUM3 ; VLDLR ; VLDLR-AS1 ; PLGRKT ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_319800174 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers