SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_311700042
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: liver
Biosample name: HepG2_control
Genomic region: chr3:50194991-50221831
Size: 26840
Super-enhancer rank 42
Number of SE elements: 14
ChIP density(Case|Control): 44860.376|1720.444
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC38A3 ;
ROSE Overlap SLC38A3 ; GNAT1 ;
ROSE Proximal SEMA3B ; MIR5787 ; SEMA3F ; GNAI2 ; SEMA3B-AS1 ; MIR566 ;
ROSE Closest SLC38A3 ;
Lasso ;
PreSTIGE ;
ABC SEMA3F ; SEMA3F-AS1 ; GNAT1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_311700042 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers