SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_311700038
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: liver
Biosample name: HepG2_control
Genomic region: chr19:1838046-1876807
Size: 38761
Super-enhancer rank 38
Number of SE elements: 19
ChIP density(Case|Control): 48900.8776|3252.0479
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KLF16 ;
ROSE Overlap REXO1 ; KLF16 ;
ROSE Proximal ATP8B3 ; LOC100288123 ; ADAT3 ; MIR1909 ; SCAMP4 ; ABHD17A ;
ROSE Closest KLF16 ;
Lasso ;
PreSTIGE ;
ABC REXO1 ; KLF16 ; ABHD17A ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_311700038 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers